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@JochenKursawe @JeremiahZartman @pavelbrodskiy Have fun, see you at @SMB_MathBiology #SMB2017
SMB2017 - Job Board: postdocs with myself and @theosysbio. Get in touch for more details! @SMB_MathBiology #SMB2017 https://t.co/LtLVw69mAj
#SMB2017 is nearly upon us! If you failed to register for the conference, banquet or field trips, we'll figure it out on Monday...
Attending #uofu Mathematical Biology Alumni Conference this weekend & #SMB2017 Exciting days of cutting edge math modeling ahead ššš»āļøāļø
Onward to
*UT Math Bio reunion
*#SMB2017
*SURB final week (while away)
*#MathFest2017
It's going to be a great couple of weeks in math bio!
To save #SMB2017 folks the look-up: At airport, light rail (TRAX) at Terminal 1 end. Transfer Courthouse. Red to U.ā¦ https://t.co/07DP8Z1ZqW
It's gonna be hot in Utah at #SMB2017. Bring your #SMB š¦ water bottle. Don't have one yet? Get yours at the membersā¦ https://t.co/PkPKla6U8M
.@SMB_MathBiology, @smb2017, @theheikman, @dendroicap, @SantiagoSchnell, should we use @smb2017 or #SMB2017 in tweets for next week?
OK, #PhysiCell 1.2.0 testing on the liver metastases has gone very well. Next up: plastoelastic mechanics for the pā¦ https://t.co/RT3QGtDhvO
@MathCancer @smb2017 @theheikman @dendroicap @SantiagoSchnell #SMB2017 is the official hashtag, but feel free to taā¦ https://t.co/QbsJjo9xKk
@smb2017 @ara_anderson @CancerConnector @Chaste_Project @AlexGFletcher @theheikman @dbasanta Results to be presenteā¦ https://t.co/6wXW1v9Lrc
@EnderlingLab will be represented at #SMB2017 by @santiadn (oncolytic virus), Rachel Walker (systemic immunity) & Tom Lewin (radiotherapy)
@smb2017 @ara_anderson @CancerConnector @Chaste_Project @AlexGFletcher @theheikman @dbasanta OK, going big and workā¦ https://t.co/7YomsDzw1p
Attending #SMB2017? Prepare for #SMB2017swag!
After a long journey via Korea we are finally on our way to Salt Lake City @smb2017 #SMB2017
Please say hello to @adrianne_jenner, my mentee at #SMB2017. She's giving two talks on oncolytic viruses (links toā¦ https://t.co/ZAqtBMGtsQ
A few things to get done in the morning, then off to #smb2017 in Salt Lake City. https://t.co/Dh9WU26ZZq
Missing #SMB2017 this year. Wishing lots of fun and exciting science to all @SMB_MathBiology friends and colleagues at @UUtah this year
Why not start my time in Salt Lake City for #smb2017 with a hike up a mountain? https://t.co/JcrenEnlYK
Safe travels to the huge WCMB @OxUniMaths contingent heading to present research at #SMB2017 in Utah this week!
Monday morning, my @iusoic PhD student @jmetzcar shows our new #OpenSource vasc. metastasis model. #SMB2017 https://t.co/CyWqn6hiWq
@iusoic @jmetzcar An efficient framework designed for networks of mets, for use in optimization projects like ourā¦ https://t.co/3hRMDt261H
Day -1 of @smb2017 - Mentoring Workshop! #SMB2017
Working hard for @SMB_MathBiology #SMB2017 https://t.co/EFF3kdQxh8
#SMB directors and committee chairs at annual board meeting shaping the future of the Society for Mathematical Biolā¦ https://t.co/aRSzLpAgSY
Any pathologists going to be at @smb2017? Would love to connect! #SMB2017
@SMB_MathBiology members, please welcome President-Elect @KirschnerDenise to Twitter! Just in time for #SMB2017
#SMB2017 Early Career workshop, organized by Caroline Bampfylde. Great learning & network opportunity for studentsā¦ https://t.co/VGWE7BezHr
. @MathCancer Run gpedit.msc select update policies and check no restarts with user logged on. #SMB2017
Join us tomorrow afternoon for a session on liver modeling, esp. in cancer. #SMB2017 1/7
https://t.co/inFpxbtARx
James Glazier will speak on virtual toxicology with CompuCell3D. #SMB2017 2/7
MS10 on Monday afternoon
https://t.co/inFpxbtARx
Jessica Sparks will show coupled flow/mechanics models! (poroviscoelastic) #SMB2017 3/7
MS10 on Monday afternoon
https://t.co/inFpxbLbJ5
#smb2017 @KirschnerDenise https://t.co/xKozxQBPGl
Historial dinner of @SMB_MathBiology Presidents and #BullMathBiol editors @smb2017 Set your interview for the Livinā¦ https://t.co/bhKSsrdWa3
I will speak on cm^2 agent-based models of liver metastases using #PhysiCell. #SMB2017 4/7
MS10 on Mon. afternoon
https://t.co/inFpxbLbJ5
Hermman Frieboes will talk about modeling nanotherapeutics in tissues. #SMB2017 5/7
MS10 on Mon. afternoon
https://t.co/inFpxbLbJ5
Shannon Mumenthaler will talk about high-throughput imaging techniques. #SMB2017 6/7
MS10 on Mon. afternoon
https://t.co/inFpxbLbJ5
The session kicks off with a primer on liver anatomy, flow, mech., function. #SMB2017 7/7
MS10 on Mon. afternoon
https://t.co/inFpxbLbJ5
#SMB2017: I'm recruiting PhD students @USU_Ecology! Contact me for details @smb2017 https://t.co/aw1h3HL1Gg
Sad to leave #2017SDB early - the conference was fantastic! Now looking forward to next couple of days of #SMB2017!
Indiana University is recruiting undergrad and graduate students to its new intelligent systems engineering program. (1/3) @iusoic #smb2017
@iusoic We have space and rolling admissions for great students in the bio track, w heavy computational modeling component! (2/3) #smb2017
@iusoic Talk to James Glazier or me for details. Come do great computational multicellular biology with us! (3/3) #smb2017
@SantiagoSchnell @SMB_MathBiology @smb2017 That's a lot of legends right there! #SMB2017
| Monday | to Top |
Sorry I'll be missing this years #SMB2017 I was especially looking forward to @mcapellanus plenary but instead I'mā¦ https://t.co/Cd9gbEYKDD
@santiadn #SMB2017 of course.
Can't wait to hear about all the incredible work being done in our MathBio community, bring on @SMB2017! #SMB2017
Follow #SMB2017 this week. This is the Annual Meeting for the Society for Mathematical Biology (@SMB_MathBiology). Fantastic math bio work!
@SMB_MathBiology Be sure to watch coverage by @mathematista, @mcapellanus, @roeland_merks, @noellebeckman,ā¦ https://t.co/ZVsPnvCxCv
You know the talks are going to be hot when there's conference branded sunscreen! #SMB2017 https://t.co/mG5xLnBVGL
Welcome to @UUtah, #SMB2017! Here's our introduction of your field to our campus community, via prof Jim Keener: https://t.co/o1J9HoOVwD
Day 1 of @smb2017 getting started off with @mcapellanus ! #SMB2017
@ShelbyM6493 @smb2017 Be sure to use #SMB2017 too
Mark Chaplain (@mcapellanus) now kicking off his plenary. Will speak about multiscale modeling of cancer. #smb2017
.@mcapellanus: Starts with his classic "mathematicians vs. biologists" and their train tickets story. :-) #smb2017
"modeling cancer at multiple scales" by @mcapellanus, wonderful way to start off #smb2017
"If you need assistance, keep an eye out for diffusing elk." #SMB2017
.@mcapellanus: So far, showing much background info on cancer, classification, staging, and scales. Great for non-cancer audience. #smb2017
@mcapellanus kicks off #SMB2017 with a plenary talk on modelling cancer at multiple scales
.@mcapellanus: cancer is a multiscale problem: affects the body at all scales, and all scales influence its progression. #smb2017
.@mcapellanus: gives a lot of nice thoughts on finding that sweet spot between simplification and detail. #smb2017
Chaplain - Ad localized goal of treatment is to keep tumors small and localized. One can live with such. #smb2017
.@mcapellanus (paraphrasing): if a model is too idealized, don't learn anything relevant about the real system. #smb2017
.@mcapellanus (paraphrasing): if it's too complex, can't analyze it and learn anything. #smb2017
.@mcapellanus: shows NF-kappa beta videos: a transcription factor, shuttles back and forth between cytoplasm and nucleus #smb2017
.@mcapellanus: NF-KB is a great example of a negative feedback loop. https://t.co/fobQ1OHjdo #smb2017
.@mcapellanus: prior models (2-ODEs): no oscillations in well-mixed ODE models. Need to introduce delays to match real world. #smb2017
.@mcapellanus: BUT, if you model diffusion of the 2 species between cyto and nucleus, the oscillations emerge. Spatial process! #smb2017
.@mcapellanus: Kobayashi (not Maru) not just a training scenario to wreak havoc on Star Fleet cadets. Great Hes1 data source. :-) #smb2017
.@mcapellanus: All this great work was done w former student Mark Sturrock, published 2013. https://t.co/9e5A7dNxFi #smb2017
.@mcapellanus: also done this with p53/MDM2, or with NF-kB. #smb2017
.@mcapellanus: NF-kB. ~50 coupled stochastic reaction-diffusion equations. "Not just a couple ODEs and a bifurcation." #smb2017
@mcapellanus now moves on to joint agent-based modeling with Dirk Drasdo, Ignacio Ramis-Conde, on beta-catenin/E-cadherin #smb2017
.@mcapellanus moves up a scale from gene transcription dynamics to focus on individual-based, force-based models of tumour growth #smb2017
@MathCancer @mcapellanus For a literary depiction... #smb2017 https://t.co/OG97kwkXkH
Delighted to encounter hes1oscillations in Mark Chaplains opening talk at #SMB2017 @PapalopuluLab - delays emerge from spatial interactions
@MathCancer @mcapellanus "Space"... Maybe not the "Final Frontier" but certainly critical to understanding #Biology #smb2017
.@mcapellanus: Shows work with D. Schlatterer on agent-based models of cell migration in ECM fibers. Cells realign fibers. #smb2017
.@mcapellanus agent-based model: stiffness and alignment both important for cell motion in interactions with matrix #SMB2017
@JoshuaABull @MathCancer @mcapellanus Dynamics of nested populations (molecules => cells => tissues => individuals) are key #smb2017
@mcapellanus It gets interesting with multiple cells. Cells follow tracks laid by others. #smb2017
@MathCancer @mcapellanus Key mechanisms in the #evolution of #multicellularity, of which #cancer is a failure mode #smb2017
.@mcapellanus kicks off #SMB2017 with models at all scales of cancer growth and development https://t.co/cY8hgzQcVQ
Observation on @mcapellanus plenary at @SMB2017 : a lot of tumor biology involves hijacking of "normal" processes. #smb2017
Chaplain - space is important; affects time. Also need to connect different scales. #smb2017
.@mcapellanus: you have to be flexible: have to be willing to step away from your "pet technique" if problem calls for it! #smb2017
Chaplain - Often have to develop new solution methods. #smb2017
"Forget your pet approach!": .@mcapellanus stresses importance of choosing right model for the job, not sticking with favourites! #SMB2017
.@mcapellanus: palpable cancer is ~10^9 cells. Insane computational effort, but working with Z. Szymanska to get there #smb2017
@mcapellanus @smb2017 Makes it that more important to study/understand the mechanisms and robustness of failure modā¦ https://t.co/s4WseOHbv8
Shameless self-plug: They need IBM supercomputer + 3 weeks to do 10^9. We can do 10^6 in 1-2 days on a desktop. :-) #PhysiCell #smb2017
.@mcapellanus says to say hi to @ara_anderson in Dundee via @twitter at the close of this talk. :-) #smb2017
@ara_anderson prepare for an onslaught of tweets - @mcapellanus ends his plenary telling us to tweet-ask why you're not here?! #SMB2017
Chaplain ends talk with a comment on Sandy Anderson being in Dundee rather than at #smb2017 Classic ribbing. ;)
@KirschnerDenise introducing @mcapellanus , opening plenary lecture speaker and former #SMB president #SMB2017 https://t.co/ZGMG0ohwAr
@mcapellanus ends his Plenary talk with a plea to call out @ara_anderson for not attending thr meeting #SMB2017 juā¦ https://t.co/pJCz4N1FJA
Chaplain (earlier) - Spatial movement of molecules important to oscillations without adding delay. Then add stochasticity. #smb2017
How good are the plenary speakers at @smb2017? They have their own baseball cards! @mcapellanus kicks off #SMB2017. https://t.co/caFg29pa4F
A punchline of @mcapellanus' @SMB2017 plenary: "Space: the final frontier..." Spatial dynamics matter. #SMB2017
Now at #SMB2017 session on cancer dynamics. First speaker, Josie Athens
Athens - A discrete stochastic model to simulate the multistep transformation to cancer. #SMB2017
@santiadn 's mini symposium on viruses and cancer now at #SMB2017 . First speaker @dwodarz https://t.co/HCrXVitFIw
Cartoon abstracts for research papers! https://t.co/euw0NYGh6b #SMB2017
@dwodarz talking modeling of viral oncolytic therapy. Wonderful intersection of two modeling fields #SMB2017
Athens - Study (compare) different kinetic paths to cancer #smb2017
James Osborne - Multicellular modeling of colorectal cancer #smb2017
@DIYOzzy begins the first talk featuring @Chaste_Project at #SMB2017 with his work on multicellular modelling of colorectal cancer
Osborne - Using Tan et al. model - 6 differential equations. #smb2017
Excited for the start of #SMB2017 in SLC! My talk on shape evolution, resonance, and performance for heaving flexibā¦ https://t.co/JzBk9qUEeX
A quick dash down the hallway to Raluca Eftimie's talk on interactions between Oncolytic Viruses and Macrophages! #smb2017
@smb2017 @SMB_MathBiology #smb2017
Raluca Eftimie highlights the need for data distinguishing between M1 and M2 macrophages to tune models of oncolytiā¦ https://t.co/zuG2SdDmpB
Building immunological models without data š£š¤¦š»āāļø š #SMB2017
several cancer related sessions throughout the week! interesting talks in the "Cancer Dynamics" session happening now #smb2017
...aaand a dash outside to the Officer's Club for John Burke on clinical uses of modelling. Utah is seriously, seriously hot! #smb2017
@JoshuaABull @DFKW_MS4 Check the markers...even if authors don't use the language, the information is often there. #SMB2017
John Metzcar - The role of hypoxia in tumor development. Main focus on breast cancer. #smb2017
@MattHHolden @MarisaEisenberg @smb2017 Hopefully the message was that we should move on & stop harping on it becausā¦ https://t.co/aHaLLqpAW8
Metzcar - Modeling tumor enviorment as a continuum (PDE) #smb2017
Metzcar - coupling environment model with a tumor moddel. Cell movement, growtth, and death. #smb2017
John Metzcar of the @MathCancer lab at @IUBloomington is currently showing model of the effect of hypoxia during tumor metastasis #SMB2017
Great talk by #JohnMBurke on pragmatic iterative math modeling to aid in clinical trial design @AppliedBioMath #SMB2017
PhD student John Metzcar @jmetzcar giving his first SMB talk on hypoxic metastases at #smb2017 https://t.co/0mzPozBD1e
#smb2017 macaroni and cheese all day, every day. Please.
I think it's safe to say the U of U campus is slightly hillier, hotter and sunnier than Oxford... #SMB2017 https://t.co/t1TnjxwDIn
I think it's safe to say the U of U campus is slightly hillier, hotter and sunnier than Oxford... #SMB2017 https://t.co/kWgW2phFs4
Afternoon #smb2017 plenary lecture: Philip Maini - "Modeling Collective Cell Movement"
Enjoy, you're in for a treat! #SMB2017 https://t.co/7TpUHBY0Jf
Hang on to your hats: the legend that is @WCMBlog's own Philip Maini is about to kick off the afternoon with his plenary on cell movement!
Next up is Philip Maini, giving his prize talk on collective cell migration. Important in neural crest migration, angiogenesis. #smb2017
Winfree Prize recipient, Philip Maini presents "Modeling Collective Cell Movement" #smb2017
Maini: Math models can show what's impossible, what could happen, but experiments can verify which of those does happen. #smb2017
Maini: notes that neural crest work is with @ruth_baker, Kay, McLennan, Dyson, @LinusSchumacher. #smb2017
Maini - Cells don't stay put, they move to where they will function. Understanding normal development can help w cancer. #smb2017
Maini - looking, via agent-based modeling, between cell attraction & repulsion. Can result in pattern development. #smb2017
Maini - We start with the simplest hypothesis and, when that doesn't work, move to the next simplest. #smb2017
"If I were a pure mathematician ...[redacted (to protect the innocent)] ..." P. Maini #smb2017
Members of @SMB_MathBiology: 946
Followers of @SMB_MathBiology: 937
Race to 1000!
#SMB2017 #jointheintersection
Great talk by Philip Maini on collective cell migration at the SMB annual meeting #SMB2017 #Utah @JenniferOwen123 https://t.co/tMzRNfYAAH
Maini: to get neural crest collective migration, models need leader and follower cell populations. Not just external signals. #smb2017
Maini - Diffusion didn't work. Neither did VEGF as a chemical attractant. Leader/Follower (2 types) more promising. #SMB2017
Find a friend & get them signed up for a @SMB_MathBiology membership and for Twitter! #SMB2017
Maini: experiments indeed validated the two-population (leaders / followers) prediction of the math models. #smb2017
Here's the paper Maini referenced on leader/follower phenotypic switching: https://t.co/lxCpd7WBUM #smb2017
All models are wrong, but it's when they're wrong that they're fun - Philip Miami #smb2017
Maini - It's more exciting when your model doesn't agree with experiment ; It means there's more to learn. #smb2017
"Using experiments in a chick to mimic a human is ~ as abstract as using a math model to mimic a human. We are all modelers." Maini #SMB2017
"All models are wrong, but when they're wrong is when they're fun." -Philip Maini @smb2017 #SMB2017 https://t.co/ESlfsZYoWc
Great to see Philip Maini explain the work of my former office mate @LinusSchumacher in his Winfree prize talk at #SMB2017
#SMB2017 "All models are wrong but wrong models is when you learn!"- Philip Maini #truth
Maini makes a great point: when a math model is wrong, or doesn't agree with data, you learn something. Wrong is exā¦ https://t.co/5PBCECXn9u
"Nearly all models are wrong. And when they're wrong is when it's fun!" Philip Maini #SMB2017
Maini - Leaders and followers aren't fixed sets - we have phenotypic switchng. #smb2017
Now Maini moves on to angiogenesis modeling with Helen Byrne and Samara Pallay. #smb2017
Philip moves on to angiogenesis work with Samara Pillay and Helen Byrne #SMB2017
Maini: using a very old "snail trail" conceptual model, was also a leader-follower type of phenomenon. #smb2017
@ramblemuse @MathCancer Knowledge progresses via informed failure. #smb2017
Maini: old work by McElwain (1985) Leah Edelstein (1982) had PDEs for tip, sprout cells, and phenotype switching. #smb2017
Maini - The snail-trail model. The movment causes a trail to be left behind. #smb2017
Maini: @ara_anderson and @mcapellanus did great work turning continuum model into discrete angiogenesis model. #smb2017
Maini: BUT, turning discrete back into PDE model doesn't match. Leads to new models. #smb2017
Friend finder! #SMB2017 https://t.co/mUOdJwBbDu
we've heard requests for a list of attendees to find old friends (or new), so here it is! https://t.co/UHLGECzUYu
Maini: mean-field assumption seems to be where much discrete-continuum model matching seems to break down. #smb2017
This explains why he enjoyed supervising me... I'm wrong all time! Must have been exciting. #SMB2017ā¦ https://t.co/4cFQJz9BPo
Maini makes a great point: when a math model is wrong, or doesn't agree with data, you learn something. Wrong is exā¦ https://t.co/5PBCECXn9u
Maini: closing with epithelial sheet work with @AlexGFletcher, James Osborne, and others using @Chaste_Project #smb2017
ChasteWatch 2017: Maini discusses comparison of models with @DIYOzzy, @AlexGFletcher, Gavaghan, Pitt-Francis @Chaste_Project #SMB2017
Maini - Running different models on cell sorting due to different adhesions. #smb2017
Maini work with @AlexGFletcher et al: major problem that many models of same epithelial sheets can give very different results. #smb2017
'The role of volume exclusion can lead to chaos...' Great talk by Philip Maini. #SMB2017 https://t.co/5rC6vs0BdW
Philip Maini presents work from @AlexGFletcher comparing models of epithelia. "We've become biologists; diff. answeā¦ https://t.co/4ECCtjyJ0b
Maini - We have to be careful that we aren't attributing reality to model artifacts. #smb2017
@AlexGFletcher @SMB_MathBiology Enjoying great talks so far, inc Philip Maini's prize lecture about model choice wiā¦ https://t.co/GgoJbRrZNZ
#SMB2017 Mentoring lunch. Working hard mentoring the future generation of math-biologists @KirschnerDenise https://t.co/wrdiGDTNQl
Maini - You always have to read the conclusion based on what the assumptions were. #smb2017
When modeling, "you always have to be careful to read [and state] the conclusions based on the assumptions made." Philip Maini #SMB2017
Packed house for Winfree prize winner Prof Philip Maini @OxUniMaths #SMB2017 @SantiagoSchnell introducing https://t.co/Zq9hF7bXtP
@aledni_den kicks off the minisymposium on tumor-immune dynamics with her work on Macrophages in cancer #SMB2017
Session on the liver at #smb2017 because it embodies a rigorous test of multiple processes.
Paul Macklin - If you can model the liver you can model a lot of things. #capabilities #smb2017
"Lots of mathematics of synchrony developed in neuroscience can be used in ecology." Alan Hastings #SMB2017
Macklin - Liver cells are mechano-sensitive. Flow can affect phenotype. Perfusion affects organized tissue or "liverwurst". #smb2017
#smb2017 https://t.co/zAPTpOJjdP for #AlanHastingsTalk.
James Glazier modeling liver toxicology at the sinusoid scale in MS10 liver session (Alpine room) at #smb2017 https://t.co/Up5CIACyr6
Next up in the tumor-immune minisymposium is a very well made and beautifully animated presentation from Adarsh Kumā¦ https://t.co/6InVw60JYV
Suzanne Robertson shows how important nestlings are to the transmission of West Nile Virus. No feathers = mosquitoā¦ https://t.co/LPxv8xeKzP
James Glazier - Acetaminophen has a very low effectiv e-dose to fatal-dose ration.Liely would be banned apart fr political reasons. #smb2017
To learn more about James Glazier's work and CompuCell3D, have a look at https://t.co/f374x0zfeg.
#OpenSource #smb2017
We have postdoc openings in Viral/Bacterial Modeling! https://t.co/eJbIRcIKxO
#SMB2017
And take a look at the upcoming CompuCell3D workshop July 30-Aug 4 at @IUBloomington #smb2017
https://t.co/dKWOG1EQyV
Glacier perturbs a reference simulation to model Tylenol metabolism in a pop of 1000 virtual patients. Outliers emeā¦ https://t.co/mfdIzkloP0
Glazier - In the populatrion, you will see people with very different responses to acetominophin. #smb2017
Most susceptible patients: those w highest drug import molecules (APAP transporters) Glazier in MS10 #smb2017
Glazier - Beginning to be able to characterize person versus response. #smb2017
Become our 1,000 @SMB_MathBiology to win an #AmazonGiftCard. To learn more about benefits and join, visit: https://t.co/4sJoAj9HAD
#SMB2017
Glazier: now starting to model flow in connected liver sinusoids built from in vivo flow imaging MS10 #SMB2017
Love those outliers! #smb2017 https://t.co/PaD4UlaI9l
Glacier perturbs a reference simulation to model Tylenol metabolism in a pop of 1000 virtual patients. Outliers emeā¦ https://t.co/mfdIzkloP0
Glazier - Details of uptake can determine spatial distribution of does of APAP. #smb2017
Looking for a job? #SMB2017 - Job Board https://t.co/ui7yUkAodw
Mackline substituing on presentation on modeling toward being able to grow new livers. #smb2017
@MathCancer showing a finite element model of perfusion and some slick computational tools to build models #SMB2017 https://t.co/3eh2kcZ28N
Omar Saucedo from @mbi_osu combines graph theory and dynamical systems to model Zika transmission. #SMB2017 https://t.co/sD3ay40P2d
@MathCancer begins his own talk now on agent-based simulation of colon cancer metastases in large liver tissues #smb2017
To learn more about our #OpenSource codes, please visit https://t.co/sRANCmFBAH #smb2017
Macklin - A lot of cancers metastasized to the liver. How can we modify that? #smb2017
#PhysiCell 1.2.0 (the version used for our agent-based liver model) will be released in next couple of weeks. #smb2017
You can see our #PhysiCell preprint on @biorxivpreprint : https://t.co/EGmtApRmlZ. To be revised when we resubmit to @PLOSCompBiol #smb2017
.@MathCancer highlights value of running simulations with > 10^6 cells on a single terminal - allows high throughput of simulations #smb2017
@MathCancer #SMB2017
The overall liver model will also be #OpenSource when we submit for publication. #smb2017 https://t.co/bIVuD65vZP
Come learn about the biophysics of diffusion, transport, and more at the Physiology session CS7 @smb2017 tomorrow at 10:30 #SMB2017
Frieboes: sober reality is that if hi-end targeted nanovectors can't reach each enough tumor to reach cytotoxicity, they will fail #smb2017
Frieboes: this highlights the need for computational modeling to understand and design for microvascular nanoparticle transport #smb2017
Hermann Frieboes giving a very nice talk on nano-drug-delivery to liver tumours #SMB2017
Frieboes has some super-impressive work on calibrating release of doxorubicin from nanoparticles, simulating treatment. #smb2017
His nanotherapy modeling work can be found here: https://t.co/JHmNW89YW1 #smb2017
Frieboes: closes on work to use macrophages to transport drugs. In Nanoscale (2016). #smb2017
Mumenthaler in MS10: mathematicians helped me realize what I was missing in cell biology, what cells do. I changed methods! #smb2017
Mumenthaler (paraphrasing): Now, I train my students to use traditional methods to show that they don't get the whole picture. #smb2017
Last talk of the session comes from Shannon Mumenthaler, "card-carrying biologist" and #mathonco convert #smb2017
Mumenthaler: many biomemetic models available now to study cancer. A range of complexity, cost, realism. #smb2017
Great first day of talks at #SMB2017. Learnt a lot about different organs at the minisymposium on the microcirculation. Also: free sunscreen
Mumenthaler: I like 3-D in vitro systems because they are tunable, and we can sort out confounding variables. #smb2017
Mumenthaler: uses high-throughput screening to tell between cytotoxic and cytostatic drug effects. See also our work with @edjuaro #smb2017
@edjuaro See Edwin's (@edjuaro) #OpenSource code CellPD, which has an example of cytotoxic vs cytostatic: https://t.co/SojcLltvlK #smb2017
Mumenthaler: integrating machine learning with the microscopy platform for automatic cell segmentation and identification. Neat! #smb2017
Mumenthaler shows automated high throughput system for image recognition involving machine learning classifiers - cool stuff! #SMB2017
I learnt a lot in the #smb2017 microtubules session this afternoon. Interesting talks and plenty of links to experiā¦ https://t.co/Cmlc3LJMbR
Want to know what's going on here? Come and ask me at the poster session, stand PS8, for modelling and image analysā¦ https://t.co/WYpeFwx94i
My favorite phylogeny is the corner from the #SMB2017 poster session at the Natural History Museum of Utah. https://t.co/UwtgwytqI3
#SMB2017 day 1 was awesome! Great talks, great posters. Learn about diffusion and pattern formation in tomorrow's physiology session!
#SMB2017 The #DiffusingElk are wrapping up the night after a great poster session! https://t.co/22UR1v4lvI
Helpful tips for your business #SMB2017 #SmallBusiness #followme https://t.co/2Y78tV9Htp
Having trouble prioritizing your #smallbusiness expenses? Not with these tips to help you build a thriving businessā¦ https://t.co/ALVxmWRmMv
The latest The histopathology Daily! https://t.co/UTsj2rZcNR Thanks to @atticusfinch71 @salesrecruiter @sassamersas #smb2017 #moleg
| Tuesday | to Top |
Developmental biology subgroup mixer at lunch today: Commanders Office Den. Hope to see you there! #SMB2017
Another day, another run! (And a lovely catch-up with our mentor guru Caroline Bampfylde..) #smb2017 https://t.co/X5BTvuAFwV
Ready for my talk this morning @smb2017 in Bonneville room at 11:15 #smb2017 šØāš»
Day 2 of @smb2017 begins with Atsushi Mochizuki #SMB2017
Inmunobiology & Infection Subgroup mixer at lunch today. 12:30pm in Officers Club West. #SMB2017
Tuesday morning at #smb2017 kicking off with Atsushi Mochizuki on "Dynamical behaviors of nonlinear complex systems..."
#smb2017 day 2 kicks off with plenary talk by Atsushi Mochizuki, insights into complex systems based on dynamic network structure
Join me in a campaign to get Philip Maini on Twitter before the end of @smb2017 @SMB_MathBiology #smb2017 #manageditwithfacebook
Mochizuki - Studying biological network dynamics. #SMB2017 Structural theories. Linkage logic, rate constants.
Atsushi Mochizuki kicks off Tuesday's programme with his plenary talk on modelling complex networks #SMB2017
#SMB2017
More about Mochizuki can be found here: https://t.co/9LFtpaE2zH #SMB2017 https://t.co/FVOgDWpJ7W
Atsushi Mochizuki kicks off Tuesday's programme with his plenary talk on modelling complex networks #SMB2017
Mochizuki - The system can be controlled by controlling the "Feedback Vertex Set" #smb2017
Atsushi Mochizuki presents a very cool result about controllability of networks of dynamical systems (w/ experimentā¦ https://t.co/4Jhv0GZ1vM
Be interesting to see if this is applicable to health + disease states that are themselves chaotic attractors.ā¦ https://t.co/fmpVUW7asV
Atsushi Mochizuki presents a very cool result about controllability of networks of dynamical systems (w/ experimentā¦ https://t.co/4Jhv0GZ1vM
.@UUtah, #SMB2017 is on campus! Get to know what they're all about here: https://t.co/o1J9HoOVwD https://t.co/5i6A69Zp4w
#SMB2017 immunology session begins at 10:30am. Come hear @VBernhauer talk about Smith Lab projects!
My mentee @adrianne_jenner talks this morning on modeling flu viruses as cancer treatments at 10:50 am MS16 #smb2017
https://t.co/JsDVgoV2xk
#SMB2017 session on impact of socio-behavioral aspects on disease spread is coming up!
Session on Data Science at #smb2017 leads off with Lindsay Keegan "Using correlated provinces to Predict Dengue incidence in Thailand".
Keegan: Cyclic incidence of Dengue fever. Vaccine exists but not highly used. #smb2017
I'm in MS16 this morning. First up is Yangjin Kim, on his cancer modeling work. Much of it with Hans Othmer. #smb2017
Kim: Working on glioblastoma multiforme (GBM), an aggressive brain cancer well known to @gliomath and @rrockne. ~1 yr survival time #smb2017
Yangjin Kim kicks off this morning's cancer-based minisymposium with a talk on cell infiltration into glioblastomaeā¦ https://t.co/Csaxzg9ved
Kim: Elizabeth Taylor was a GBM outlier: diagnosed 1997, died 2011 #smb2017
Kim: GBM recurs, and large part is due to cell migration within the brain. Looks at role of tumor microenvironment (TME) in this. #smb2017
Yangjin Kim giving his 2nd talk of @smb2017 - the role of the microenvironment in regulation of glioma invasion #SMB2017 #mrpopular
Kim discusses the crucial role of tumor microenvironment in altering macrophage phenotype - some great work on this at #smb2017 this year!
Karim Khader - "A Markov model for antibiotic use and decision making" #smb2017
"In nature, everything might look stable, but when we perturbe a little bit, we can get huge outbreaks." Susmita Sadhu #SMB2017
Kim does a massive system of PDEs to simulate this system. Big question is how the whole thing gets calibrated. (1/2) #smb2017
@DFKW_MS4 Unfortunately not enough (perpetual problem)! See our *really* recent JTB paper on the biomarker challengā¦ https://t.co/e4u0fpbaWc
Kim: Use sensitivity analysis on 10k simulations to figure out what parameters have to be calibrated. (2/2) #smb2017
.@adrianne_jenner now presenting on using flu virus as an anti-cancer treatment. #smb2017
.@adrianne_jenner: Can a genetically engineered virus be used to fight cancer? starts w viral replication process. #smb2017
Khader - Days of use is typical of use measuremt. No standard for measuring overuse. #smb2017
.@adrianne_jenner: virus doesn't replicate immediately -- there is a delay for it to unpackage, get to nucleus, insert DNA ... #smb2017
.@adrianne_jenner: Process is very heterogeneous from one cell to anohter. How can we model this? #smb2017
.@adrianne_jenner: Use prob. distributions for viral replication start time, viral replication duration. #smb2017
.@adrianne_jenner: shows a nice system of ODEs (with the prob distributions) for number of cells replicating virus, etc. #smb2017
.@adrianne_jenner: this would be fun to simulate in an agent-based model. :-) #smb2017
My question for .@adrianne_jenner: model assumes constant rate of virus replication. Can the rate vary? (e.g., infected by 2 virii) #smb2017
.@adrianne_jenner: Now, uses models to analyze experiments that remove viral proteins, look at impact on virus efficacy #smb2017
.@adrianne_jenner: plugs @smb2018 in Sydney next year! :-) :-) :-) #smb2017
A nice presentation by @adrianne_jenner on using flu viruses to treat tumors - and ending with a plug for @SMB2018!!! #SMB2017
Calibrations of replication parameters for different virus types, by Adrianne Jenner #SMB2017 https://t.co/Wh7H9UNjrv
There have been a lot of great talks at #SMB2017 so far, but it's really been kicking off here on twitter! https://t.co/PsDSn4kBFw
Next up is Khaphetsi Joseph Mahasa on modeling oncolytic potency, reduced viral tumor specificity in virotherapy. #smb2017
Wish I was at #SMB2017, but thanks to @mathcourtney, @MathCancer (and others!) for all the tweets :)
Mahasa: How can viruses that are not 100% tumor-specific be used in oncolytic virotherapy? #smb2017
@jonty3502 telling us about his work inferring parameters for velocity jump processes with @ruth_baker #SMB2017 https://t.co/d4605ek4nP
#SMB2017 Submit your "Beauty of Theoretical Biology" here: https://t.co/R3C77CggeG
Elisabeth Rens modelling cell-matrix adhesion; focal adhesions; @ Commander's House, South Parlor; #SMB2017 #CellularPottsModel
@jonty3502 does a great job talking about his work on inference for biological transport models! #smb2017 https://t.co/qjDXgemLty
The list of @SMB_MathBiology subgroups for deciding on a noon mixer: https://t.co/kaUDPmlwpM #SMB2017
Next up is Chang Gong (@JohnsHopkins), on tumor-immune interactions via multiscale systems biology models. #smb2017
Gong work is also wish Sasha Popel. :-) #smb2017
@DFKW_MS4 Your lab likely aware of this stuff on attractors and cancer, doesn't seem amenable to talk this morning.ā¦ https://t.co/h48EqPNqaR
Gong: Shows an impressive 3-D agent-based framework. (Custom code? #OpenSource?) #smb2017
A great session for @ruth_baker's lab: @JochenKursawe is up next with his cell tracking algorithm for epithelial tiā¦ https://t.co/c76Kz4A1B9
Cell tracking via maximum common subgraphs is just like doing a jigsaw @JochenKursawe #smb2017
Paper here: https://t.co/tFw37bAq37 #SMB2017 https://t.co/obv8oMB7aX
A great session for @ruth_baker's lab: @JochenKursawe is up next with his cell tracking algorithm for epithelial tiā¦ https://t.co/c76Kz4A1B9
mixing change when ill, work by @KimmekeVK and @HensNiel mentioned at #SMB2017 https://t.co/cbf7B1MJEB
Last talk: Evans Afenya (@ElmhurstCollege) on math modeling in cancer prevention and treatment #smb2017
@ Alpine Room, Guest House; Heidi Dritschel modelling cancer induced T-cell exhaustion #SMB2017
Standing room only as @heidijessica explains her model of T Cell Exhaustion - happy birthday! #WCMBOnTour #SMB2017 https://t.co/40QvxVuQd2
Who wants to meet the BMB editors?! Today is your chance! Head to the conference center lobby at 12:30pm. #SMB2017
Having a very inspiring time at #SMB2017 with @StAMathBio-logists @mcapellanus -shown here while finishing his openā¦ https://t.co/7KzbCmSerT
#SMB2017 Afternoon off to explore beautiful Utah! Enjoy š
@vcolizza Wish I had figured out the whole cloning thing by now... #SMB2017
#saltlakecity #universityofutah #smb2017 @ The University of Utah https://t.co/5YEExkftkh
If you can see this tweet, we've made it back alive from Albion Basin! Sorry for quality, they're phone pics of myā¦ https://t.co/bCbpdQT7e3
Great job @heidijessica - true dedication is presenting a talk on your birthday! Enjoy the evening off to explore Uā¦ https://t.co/tYgZmVEVGV
Standing room only as @heidijessica explains her model of T Cell Exhaustion - happy birthday! #WCMBOnTour #SMB2017 https://t.co/40QvxVuQd2
JTB editorial board dinner! Fantastic colleagues, food and science! #SMB2017 https://t.co/BlfbUveyNO
Congratulations to @WCMBlog's own Philip Maini on receiving the Winfree Prize from @SMB_MathBiology at #SMB2017. A well-deserved honor!
@smb2017 This brings together the many meanings of the #smb2017 theme, mathematics and health: bodies, minds and the world around us.
We found a mountain to climb on a fantastic excursion to Park City. What a view! #SMB2017 https://t.co/cIHoqLAm6M
The ascent proved treacherous. We stopped following @jonty3502 after his audacious off piste adventure put our liveā¦ https://t.co/6fSuojOz5x
Saw some great talks today at #SMB2017
#SMB2017 Day 2 volunteer duties at moderated session: āRecent Advances in Modeling Vector-Borne Disease Transmission.ā š
2) Examining the Dynamics of Zika Infection: When Does Sexual Transmission Matter? #SMB2017 #math #maths #mathbio #broigotthis
@hisotalus LOL! For a moment I was thinking, āWell the #SMB2017 hike didnāt look that dangerous...ā
BioFVM 1.1.5 (SMB 2017 edition!) is released. Cross-platform 3-D diffusion solver for multiple substrates. #smb2017ā¦ https://t.co/8t8p1off6B
Includes bugfixes and upgrades for the upcoming #PhysiCell 1.2.0 release. Also simpler code to initialize the microenvironment. #smb2017
| Wednesday | to Top |
Day 3 of @smb2017 begins with Marissa Baskett #SMB2017
Day 3 of #SMB2017 opens with Marissa Baskett - "Modeling the drivers of coral response to climate change fr genes to communities." #climate
We're changing gears for this morning's plenary session here at #smb2017 - Marissa Baskett starts the day with ecological modelling
Baskett - Local management - Protect capacity to respond to climate change. #smb2017
Baskett - Coral bleaching assoc with high temps often in El Nino years. Difficulty in building Ca backbone w carbonic acid. #SMB2017
Baskett: Coral incredibly diverse. Not just one threshold. #smb2017
Baskett: Added evolution to coral projection model. Focused on Acropora hyacinthus. #SMB2017
Baskett: Size projection into shape and susceptibility to dislodgement under wave-stress. Probabalistic. #smb2017
Baskett: More diificulty building skeleton -> spectrum of slower growth or weaker skeleton. #smb2017
Baskett: Calculate population growth factor as f(phenotype). Add evolution of phenotype as climate response. #smb2017
Baskett: Variance of phenotype. Random sampling from phenotype distribution. Does rplacement stay > 1. #SMB2017
Baskett: Shifting to thermal stress. Who to protect? most vulnerable vs most likely to survive. #smb2017
#SMB2017
Baskett: Magnitude of bleaching events more important than frequency. #SMB2017
Baskett: Mounding coral slower growing but more resistant to bleaching. #smb2017
Marissa Baskett illustrates the tension between resistant and resilient populations in surviving environmental chanā¦ https://t.co/cxztq168mS
Baskett: Two species model - more resistant coral vs more resilient coral (growth & recruit) vs macro-algae. #smb2017
Baskett: Resilient coral - faster growth and greater basin of attraction vs macro-algae. #smb2017
Baskett: Synergy between two coral types in holding off macro-algae. "competitor enabled rescue effect". #smb2017
#SMB2017 Inaugural Immunobiology & Infection Subgroup mini symposium starts at 10:30am š»š https://t.co/lDREtRaTFf
Marissa Baskett: "Competitor-enabled rescue effect & enhanced community resilience in coral": coral are stronger together. #SMB2017
Baskett: emphasizes the importance of sensitivity analysis to determine relative importance of factors. #smb2017
Marissa Baskett: Sensitivity analysis helps conservation managers know what most needs protection. #SMB2017
Conclusions from M. Baskett @smb2017 We rely on the power of parameters + sensitivity analysis for management when data is limited #SMB2017
Awesome talk by Marissa Baskett on modeling resistant and resilient coral systems' coexistence in the face of climaā¦ https://t.co/p3x3zGPTSk
Arran Hodgkinson - Single-cell heterogeneity (cancer treatment) #smb2017
#SMB2017
The first cancer talk of the day comes from Arran Hodgkinson, who is focusing on tumour heterogeneity #smb2017
Arran Hodgkinson in CS9: developing a spatial, phenotype-structured model of resistance. Improvement over discrete states. #smb2017
Hodgkinson: Drug resistance in melanoma. #smb2017
Hodgkinson: Use a PDE model: flux in space, flux in structure (here a resistance axis). 5 PDEs here: cells, ECM, 2 drugs, substrate #smb2017
Hodgkinson: spatio-structural model for drug resistance. #smb2017
At the inaugural Immunobiology and Infection subgroup meeting, where immunity is within reach and quite cute.ā¦ https://t.co/dTBb8ZgbsU
Mark Alber starts by discussing the challenges of modelling multicellular tissue development. #smb2017 https://t.co/8qqgVQhJcu
Hodgkinson: fate of tumour is dependent on degree of heterogeneity at start of treatment - more heterogeneity implies resistance! #smb2017
Next up: Ibrahim Chamseddine on design optimisation of drug nanocarriers targeting tumors #smb2017
Ibrahim Chamseddine - Optimization of drug noncarriers. #smb2017
Now I hopped over to @mathematista's talk on viral/bacterial co-infections. They have plus microbes! (I'm a brain-eating amoeba) #smb2017
.@mathematista: interesting: later in recovery, bacteria can contribute to viral relapse. #smb2017
Chamseddine: Optimizer: Design variables to analysis module. Cost function back to optimizer. #smb2017
.@mathematista: I believe this is the 2011 JTB paper referenced early in the talk: https://t.co/zwSTcVuBR7 #smb2017
.@mathematista: You can have a sloppy fit to parameters but still have a predictive model. #smb2017
Susan Massey takes to the stage here in the City Creek Cancer session now, with a model of proneural gliomas #smb2017
.@mathematista avoids knockout models because they often don't just knock out *one* thing. Instead varies level/time of coinfection #smb2017
Susan Christine Massey: proneurao gliomas #smb2017
Susan Massey showing a PDE model for PDGF driven GBM. #abbvs Part of her PhD work with @gliomath #SMB2017 https://t.co/6l42LdKvm0
.@IUBloomington's new Intelligent Systems Engineering undergrad has a computing & modeling-heavy bioengineering traā¦ https://t.co/V3PHw5KuEK
.@mathematista: Timepoints matter. What looks the same at 24 hours may vary meaningfully at other timepoints. Models capture this. #SMB2017
Susan Massey's model shows the importance of early treatment of gliomas with non-competitive PDGF-inhibitors > compā¦ https://t.co/v4pYDv6DN3
Next is the start of a @mathonco double feature: first, @santiadn from @EnderlingLab predicting human pancreatic cancer cell growth #smb2017
Judy Day is up next. Tissue damage as a biomarker for immune stimulus in inflammation models. #smb2017
Day: tissue damage is a way to account for / quantify negative effects of inflammation w.r.t. host health, outcome. #smb2017
The @mathonco double bill continues here in the cancer room at #smb2017, with Etienne Baratchart from the @dbasanta lab
Judy Day's model of pathogen / pro-inflammation / damage / anti-inflammation (ODE system) can show healthy & aseptic death outcomes #smb2017
In Day's model, "aseptic death" is where pathogen is eliminated, but inflammation and tissue damage grow. #smb2017
Day shows a simple cellular automaton model of pathogen-host interactions, built in NetLogo. #smb2017
Day: 2 host defense strategies: local removes energy from all cells near pathogen-host. global removes energy from all, like fever #smb2017
Day closes with work for solid organ transplantation events. Allorecognition can see transplant as foreign. Get inflammation etc #smb2017
Baratchart: classical view of metastases arising independently from individual cells is wrong! #SMB2017
Day: ischemia and reperfusion during transplant surgery can help kick off the early inflammation and damage pathways #smb2017
@MathCancer This work was the inspiration for my bacterial model. #SMB2017
Etienne Baratchart from @mathonco elegantly showed how modelling can test as well as generate hypotheses about metastasis. #SMB2017
I'm completely shameless... #smb2017 https://t.co/Fe5rVYwLxy https://t.co/6f5kFYYa7A
Day shows a simple cellular automaton model of pathogen-host interactions, built in NetLogo. #smb2017
Now starting: John Nagy (who points out that his collaboration with @theheikman keeps the Moffitt theme alive!) #smb2017
Immunobiology & Infection subgroup theme: issues in quality, quantity, and usefulness of data š #SMB2017
Nagy: evolution vs plasticity isn't enough - to understand resistance, must investigate evolution of cells with a plastic phenotype #smb2017
John Nagy shows how his multi-scale model can help predict castration resistance in prostate cancer. #SMB2017 https://t.co/JyuwxPxzvl
The final speaker in this session is @NaraYoon12 from @CancerConnector's lab (just a hint of a fourth @mathonco link in a row!) #smb2017
@NaraYoon12 presenting recent results with @CancerConnector on collateral sensitivity and the evolution of resistanā¦ https://t.co/KRt1NHJYgp
.@NaraYoon12: how can we choose the order of multiple drug treatments to avoid resistance? Highly clinically relevant question! #smb2017
@mjsimpson77 does a great job explaining how to infer parameters for cell proliferation assays #smb2017 https://t.co/w9Kxp9lJPn
Superstar @NaraYoon12 presents a counterintuitive result: early, two drugs is worse than one of them alone; later tā¦ https://t.co/b7rzbcN9JH
An idea from the Immunobiology and Infection subgroup: we need Academic Tinder for making new collaborations. #SMB2017
We should have an @SMB_MathBiology Immunobiology and Infection Subgroup hashtag. I vote #SMBImIn or #ImInSMB.ā¦ https://t.co/q289DGeSXi
Douglas Ballroom - SMB General Meeting @SMB_MathBiology waiting for the fun to start #SMB2017 #leroiestmortviveleroi @SantiagoSchnell
Congratulations Jenn! #glassceiling #SMB2017 #whostheboss https://t.co/aqEDvnOr16
Our very own Jenn Oswald is on @MyABJ's #2017 Profiles in Power Nominees! Watch out #ATX https://t.co/S08R6hOt5K #startups #WomenOwned
day 3 of #smb2017! great cancer treatment session with talks from #mathonco labs @gliomath @theheikman @dbasanta @CancerConnector John Nagy
@SMB_MathBiology General Meeting in progress! @SantiagoSchnell and @KirschnerDenise tag-teaming it #SMB2017
@SantiagoSchnell gives a state of the society update #smb2017
To get royalty from BMB for publishing enough articles, what about soliciting 1-2 undergrad articles per issue? #SMB2017 @SMB_MathBiology
Get your @SMB_MathBiology membership before the meeting ends for current pricing! Special prize for the 1000th member š
#SMB2017
Yay @sLaMMonites' @annakmil for receiving a best poster award at @smb2017! #SMB2017
Congrats on your fancy poster award @annakmil šš¼ #SMB2017
Thanks, @BioFireDX, for supporting @smb2017! Lots of great math biologists at BioFire are paying it forward. #SMB2017
Yay @sLaMMonites' Samantha Hill for your best poster award! Now get in twitter! :) #SMB2017
It continues! Yay to Liz Fedak for your best poster award! @dendroicap's @sLaMMonites are doing great things!! #SMB2017
Jim Keener received John Jungck Award for Excellence in Education. Absolutely deserving. He changed our lives. Go,ā¦ https://t.co/XUjBWPb3Vo
4 @UUtah Students receiving poster awards at @smb2017 + Prof. Jim 'kdawg' Keener winning the Education Prize. Utah #mathbio šš¼ššš»#SMB2017
I'm out of batteries, so I won't be able to tweetcast @USCSysBio_Lab fantastic award talk, but congrats on a well-earned award! #smb2017
Stacy Finley giving the Edelstein-Kesher price talk on "The angiogenic balance in breast tumor tisue..." #smb2017 #SystemsBiology
Finley - More than 70 diseases based in angiogenisis. #smb2017 Her focus on cancer and VEGF
Time for the first ever Leah Edelstein-Keshet prize talk, the plenary session from @USCSysBio_Lab on angiogenesis in breast cancer #SMB2017
Finley: Angiogenesis a balance between promotters and inhibiters. Models important in understanding multi-path responses. #SMB2017
.@USCSysBio_Lab: a multifaceted system ripe for mathematical modeling #smb2017 https://t.co/CMli7ybou0
@USCSysBio_Lab: use BioNetGen to auto generate a system of 130 ODEs! #smb2017
Finley: non-spatial compartment model (tissue) with 130 ODE's. Sampling of parameter distributions to gain output distribution. #smb2017
@USCSysBio_Lab: use model to explore potential TSP1 kinetics. Neat! #smb2017
@USCSysBio_Lab: math model can explain why some heavily-pursued TSP1 mimetics don't pan out in trials. #smb2017
Finley: Model provides a framework for testing various anti-angiogenetic strategies. #SMB2017
Finley: Wide variation in the response to treatment. #smb2017
This Thursday evening meetup looks fun, especially for data science & computing folks at #SMB2017 https://t.co/prFfs3B8n6
@USCSysBio_Lab: tumor growth kinetics is both a prognostic and predictive biomarker. #smb2017
@USCSysBio_Lab: new compartmental model accounts for angiogenesis on tumor growth. #smb2017
Finley: Can we use the model with only data before any drug is given to predict response to treatment? #smb2017
Who wore it best? @SantiagoSchnell or @KirschnerDenise ? Either way, our presidents (past and future) are #fabulousā¦ https://t.co/0f1Ntxmtrj
@USCSysBio_Lab: differences in anti-VEGF responses can be seen even after just 1 dose! #smb2017
@USCSysBio_Lab But I'm tweeting anyway. Great talk and a great body of work!!!! :-) #smb2017
@USCSysBio_Lab: most predictive anti-VEGF response marker is a parameter describing exponential-to-logistic growth transition. #smb2017
Just heard Stacey Finley's great talk on this paper @smb2017 @USCSysBio_Lab #SMB2017 https://t.co/9W7ojCUUKj
Mechanistic Modeling Quantifies The Influence Of Tumor Growth Kinetics On The Response To ... https://t.co/RLRVJZ30Nc #bioRxiv
Over at agent-based modeling session modeling session of #SMB2017
First talk, Gary An "High-Performance computing-augmented use and analysis of Agent-based Models.. new math for biology." #SMB2017
#SMB2017 heterogeneity in disease transm session is on! my invited talk is on weekend/holiday's impact on flu spread, work w/ @HensNiel lab
Now at @Gary_An talk on agent-based modeling and analysis by HPC and HTC. #smb2017
An: Surgsiseery to stop blood loss from major wound simply technical exercise. Little can be done about patient's response. #smb2017
An: How can we trust what we think we actually know. (reproduciblity concern) #smb2017
@Gary_An: much of reproducibility problems stem from exp undersampling of processes with multiple causes #smb2017
.@Gary_An faults focus in components instead of function, among other problems in exp biology. #smb2017
An: Problem of infinite regress = "just give me that next piece of data" #smb2017
An: A phenotype definition is agnostic to scale. #smb2017
@Gary_An talks about reproducibility, scientific philosophy, and mathematics. A refreshing conceptual talk. #SMB2017
An: The "How?" of biology. Mechanism. Scale become important. #smb2017
An: A model is an explicit injection of from one level to another.. It's transparent in that assumptions and inclusion explicit #smb2017
An: The why of biology. Everything in bio a result of evolution. Abides by physics and chemistry. #smb2017
Release #PhysiCell 1.2.0 now with new phenotype but incomplete user guide? Or wait for full manual? #smb2017
/An: Heterogeneity manifestation of parameter space. #smb2017
.@Gary_An: breadth is more important than precision. Hence need for running many simulations! #smb2017 https://t.co/iIIP9Fwb3U
An: Agent-based model proxy for looking at the implications of what we know. #SMB2017
"Given the amazing advances in technology and the dramatic change in the environment of our students..." 1/2 #SMB2017
An: ABMS simplified but, in sepsis, can we determin live versus die. #smb2017
"...can we afford to continue teaching the way we were taught?" John Jungck 2/2 #SMB2017
honored to receive Leah Edelstein-Keshet prize from @SMB_MathBiology and give an award talk in front of amazing math biologists! #smb2017
Great talk @Gary_An! Now I need to pop over to another session. #smb2017
@Gary_An gives us an appreciated philosophical basis as to why math modeling of biology is important and necessary.ā¦ https://t.co/Msl6KIvokw
Now back to immunology. No laptop battery so not much tweeting.#smb2017
Kennith Blahut: Spread of Hepatitis C (HCV) via cell-free virus via cell to cell. #smb2017
Meredith Greer plugged the @maanow Curriculum Guide for undergrad math education at #SMB2017
https://t.co/7ix6WK0Qg2
The #smb2017 session on modeling crime is equal parts entertaining and math-tastic!
Meredith Greer: Math modeling courses are an opportunity for students to learn work happening now by diverse authors. #SMB2017
Found a plugin! :-) Jana Gevertz talking about robustness of immunotherapies. Very timely topic! #smb2017
About to discuss mathematical models of hematopoiesis at #SMB2017 https://t.co/AfTleEn3u6
Cool slide: Ebert maps blood cell production, from hematopoietic stem cell --> white/red blood cells #broadtalks https://t.co/hYTXlf4klM
Kenneth Blahut shows results from his ABM suggesting that most HCV transmission is cell-to-cell, not via cell-freeā¦ https://t.co/3B7iYzkGZd
Jana Gevertz presenting her cascading set of immune therapy models. #smb2017 https://t.co/yoETPzXquL
Gevertz: problem for original "optimal" treatment, based on data that turned out to be close to a bifurcation point! #smb2017
A great reference on this talk: 2017 PNAS paper #smb2017
https://t.co/xg5NHvnPAx
Effect of school on influenza spread, and different contact rate between children and/or adults, presented by Victtā¦ https://t.co/kGeJCLrdeZ
Gevertz: Don't optimize protocols on pop. averages: may not work for anybody! Better to optimize for individuals, pool results #smb2017
Next up: @adrianne_jenner (my SMB mentee!) on impact of tumor pressure on outcome of cancer treatments. #smb2017
.@adrianne_jenner: Works with a Voronoi cell-based model. Delaunay triangulation helps you find neighbors. #smb2017
.@adrianne_jenner: Does a nice job of using Hooke's law to generate a pressure that moves cells around. #smb2017
.@adrianne_jenner: proliferation probability varies with distance to leading edge. Approximates a few limits like O2, pressure #smb2017
.@adrianne_jenner: then models virus transmission in this framework. Dead cells need some time to shrink before releasing virus #smb2017
.@adrianne_jenner: Nice finding, increase virus dosage, don't get better response. Unlike ODE systems, it's not well-mixed! #smb2017
.@adrianne_jenner: immune cells move towards infected cells in her model. #smb2017
Last up: @rrockne speaking on impact of a continuum of differentiation states in hematopoiesis. #smb2017
@HayleyWarsinske presents cool results from her ABM of TB granuloma formation. #SMB2017 https://t.co/QgeEuul1K7
.@rrockne: Work is joint with Lisette dePillis, @DrAmiRad, others. #smb2017
@MathCancer @adrianne_jenner To paraphrase @mcapellanus said: (heterogeneous) Space is the final frontier #smb2017
.@rrockne: Very hierarchical stem-to-differentiated network. But new perspectives from big data. Gene expr, methylation, etc. #smb2017
.@rrockne: Implications: intermediate states for cells in this differentiation network. Not just a discrete set of states. #smb2017
.@rrockne: Look at single-cell analysis of diff. states. Clusters show overlap. Is there a phenotype trajectory on the manifold? #smb2017
.@rrockne: let's look at a 2-D phenotype space with a Y-shaped attractor. #smb2017
Norton has a fascinating talk featuring the importance of macrophages in cancer...glad to see them getting the exposure this year! #smb2017
@JoshuaABull Thatās also what Etienne Baratchart will be talking about tomorrow at #SMB2017
Kerri-Ann Norton demonstrates how a combination of two separate ABMs can lead to new insights in triple-neg. breastā¦ https://t.co/T5LllzPSxa
.@rrockne: concept of a continuum of differentiation states is emerging in biology. Need new ideas and math to represent! #smb2017
John Lowengrub presents a fascinating ABM-type from materials science that combines continuous and discrete featureā¦ https://t.co/ut1dPCbAHg
How do panels heaved at differing freq. and with differing bending moduli produce similar vortices? Find out my talā¦ https://t.co/iFkDJt5Nlc
More about Lowengrub here: https://t.co/HpELS1kHG0 #SMB2017 https://t.co/Xod1mdPipA
John Lowengrub presents a fascinating ABM-type from materials science that combines continuous and discrete featureā¦ https://t.co/ut1dPCbAHg
@KirschnerDenise Hands off to the @smb2017 team for anamazig conference dinner!! #smb2017
It's the #SMB2017 @WCMBlog delegation! Featuring the almost-on-twitter Philip Maini! Thanks for the great conferencā¦ https://t.co/VMCvwuJFQ7
Glad to see such a strong @OxUniMaths group of mathematical biologists at #SMB2017 in Utah! https://t.co/5UGuCo3MKJ
It's the #SMB2017 @WCMBlog delegation! Featuring the almost-on-twitter Philip Maini! Thanks for the great conferencā¦ https://t.co/VMCvwuJFQ7
Come on, if you're checking twitter now then you should really be dancing instead...right?! #SMB2017 #SocietyofMajesticBopping
#SMB2017 banquet was awesome! Had fun with everyone who danced with me! You know who you are. No shame in my game.
| Thursday | to Top |
Heading back to the Mitten, thanks for a great conference #SMB2017
It's been so much fun meeting the youngest @sLaMMonites and seeing their great--and lauded!--work. Academic littleā¦ https://t.co/nIMwXyZ0WD
Samantha Hill (EDGE '14) wins CQB poster award at SMB!! @edge4women #WMW @pomonacollege https://t.co/xetz0ymp4C
Looking forward to the Quantative approachs to developmental biology talks today in the Alpine Room at #smb2017
Have to say that I like the asynchronous #smb2017 talk schedule that encourages loyalty to a session and not hopping between every talk.
Last day of @smb2017 and already getting excited about @SMB2018 thanks to an intro by @Alliterativity #SMB2017
Plenary talk for last morning of #smb2017. Jonathan Dushoff, "Epedemic strength and speed: rethinking metrics for disease spread & control"
Dushoff: Dynamical models are the link between assumptions and outcomes. #SMB2017
Dushoff: Defines little r (charteristic growth constant) and big R (new cases per case) #smb2017
"R0 is the movie star of the [epidemic] story. And it has in fact been in movies. But no Academy Awards." Jonathan Dushoff #SMB2017
#smb2017 day 4 morning plenary by @jd_mathbio on epidemic spread and strength!
@jd_mathbio even mentions standard SIR model... i talk about this in my @USCViterbi systems biology course! #smb2017 https://t.co/SMzM1gZD10
Relembrando: sĆ©rie de vĆdeos produzida na #SMB2017 com repĆ³rteres mirins foi um sucesso! https://t.co/rdiz9xiedZ
Dushoff:: Linking r and R..
R using generation intervals. #smb2017
Dushoff: Generation interval look shorter at the beginning of a epedemic. #smb2017
"Generation times look shorter at beginning of an epidemic." Jonathan Dushoff #SMB2017
Is this corrected when modeling real-time outbreaks?
Time to catch up on @mathonco action at #smb2017 at my favorite St. Andrews coffee shop Taste! https://t.co/U45po8Qq4z
Jonathan Dushoff talked about r (transition) R (BRN), their relationship, meaning in treatment, and etc.ā¦ https://t.co/W5hHTU1paE
At session M33 of #smb2017 : Confronting biological models with data : dealing with complexity & sparsity 1.
First session talk: Juan Gutierrez - "Modeling across scales: From data sparsity to data overload." #smb2017
I'm spending this morning in the metastasis minisymposium in the west ballroom - first up, Leonid Hannan from @IdahoStateU #SMB2017
#SMB2017 mini symposium on "Confronting models w/ data" starting now with Juan Gutierrez @smb2017 https://t.co/z6PopLRt8o
Gutierrrez: The contex of Maria. Complexity of data across across scales. Data integration is very complex. #SMB2017
Hannan: what is the impact of surgery on breast cancer metastasis? Presents data from cohort of 673 patients treated by surgery #SMB2017
Juan Gutierrez: data integration poses tremendous challenges. We want a lot of data but it comes at a cost #SMB2017
Gutierrez: Most of the papers in mathematical biology are confined to a limited number of tools and topics. #smb2017
Gutierrez: No data repository / archive including meta-data needed for effective use. #smb2017
Gutierrez: don't ask a cellular model questions it can't answer ššš¼#SMB2017
Gutierrez: if you want data, we have more than you need! (PSA to all the data whiners) #SMB2017
Hannan: highlights importance of being aware of scaling effects when dealing with both very large and very small parameters! #SMB2017
Leah Johnson: Combining tactical and strattegic approaches to predict vector-borne diseases. #smb2017
Leah R. Johnson contrasts two broad categories of model, with an epidemiological bent. #SMB2017 https://t.co/5kFkOUymar
Next up: Leah Johnson on "Combining tactical & strategic approaches to predict vector-borne disease" #SMB2017ā¦ https://t.co/GpPRWK4rey
3 Days of the Condor? Nope, 2 days of SEIR models! #SMB2017 šš
Johnson : Using Gaussian process model.#smb2017
Yo! Letās git sum stochastic between-patch mobility matrices in da house! #SMB2017 #linearalgebra #maths #mathbio
The Sisterhood of the Traveling Waves #NoContextNeeded #SMB2017
Johnson : Bayesian estimate of R0 as function of temperature. #smb2017
Next up: John Lowengrub will be predicting the aggressiveness of pancreatic ductal adenocarcinoma #SMB2017
My MS/PhD advisor John Lowengrub speaking on pancreatic ductal adenocarcinoma (PDAC) at #smb2017 https://t.co/XJyCc5QEsf
Johnson: web: https://t.co/QOsdZUX1rd #smb2017
Reaction-diffusion detived from an SEIR model of epidemics. #SMB2017
@mathematista And don't not ask questions that can be answered. :-) #smb2017
Pic of @SMB_MathBiology president @KirschnerDenise taking pics at the banquet. Two can play this game š¤ #SMB2017 https://t.co/2lInulfX2S
Key finding: a larger infective radius = higher peak of number of infections #SMB2017 SIR models w/spatial diffusion #maths #mathbio #math
If you want to hear about trade-offs and invasions come to my talk at 3:15 in the City Creek Room during Ecological Dynamics! #SMB2017
āA mathematical model for the transmission of Louse-Borne Relapsing Feverā #SMB2017
Tip cell overtaking and competition in talk by @roeland_merks in quantitative #devbio session organised byā¦ https://t.co/rPOKIEu0eG
Key finding: if C_v, the rate of crushing of louse, is small, then R0 < 1. Crushing louses as crazy as possible is the best play! #SMB2017
Deena Schmidt Complexity reduction in models by reducing noise #smb2017
Lowengrub: nondimensional analysis of a mechanistic model gives new image analysis biomarkers for PDAC. Complements molec markers #smb2017
Pic of @mathematista tweeting a pic of @KirschnerDenise taking a pic at #smb2017 https://t.co/rIVxnXii0L
The third metastasis talk of the morning is by Leili Shahriyari from @mbi_osu examining link between immune cells and metastases #SMB2017
āModeling the importance of apiary size & structure on infectious diseases.ā #SMB2017
excellent session on modeling metastasis and clinical applications with work from L. Hanin, J. Lowengrub, @EnderlingLab, @thillen17 #smb2017
Shahriyari: May be that not all metastases arise from circulating tumor cells (CTCs). Now discussing chronic inflammation. #smb2017
#smb2017 The best tweeter award winners! Paul Macklin, Courtney Davis, Joshua Bull, Keith Grant, Drew Williamson, Fergus Cooper.
Shahriyari: chronic inflammation could lead to immune cell adaptation, causing higher levels of proliferative signalling #SMB2017
(Another talk starring Tumor Associated Macrophages too - perhaps the real stars of this year's #SMB2017?)
Shahriyari: says that chronic inflammation can eventually adapt distant primary cells to down-reg TSGs, grow as new "mets" #smb2017
Congrats @MathCancer @mathcourtney @JoshuaABull @DFKW_MS4 @FergusCooper @ramblemuse ! #SMB2017 https://t.co/rJ4eywRMZy
#smb2017 The best tweeter award winners! Paul Macklin, Courtney Davis, Joshua Bull, Keith Grant, Drew Williamson, Fergus Cooper.
Of course, the big (semantics) problem is that by definition, these are not metastases. They are new de novo tumors. #smb2017. @JoshuaABull
@JoshuaABull Maybe call them "primary-induced secondaries," but undue confusion to re-task existing definition of metastases. #smb2017
@JoshuaABull But the implications--whatever you call these things--are clear. Blocking primary cell migration may nā¦ https://t.co/fgm0nSsuqN
Key finding: larger apiaries CAN select for reduced virulence. Very Ewald style finding! #SMB2017
āModeling Differential Transmission Characteristics of Whitefly-Transmitted Cassava Virusesā #SMB2017
Glad we could help spread the good work at #smb2017!
@mathcourtney @JoshuaABull @ramblemuse @DFKW_MS4ā¦ https://t.co/nMcw1d1SDy
#smb2017 The best tweeter award winners! Paul Macklin, Courtney Davis, Joshua Bull, Keith Grant, Drew Williamson, Fergus Cooper.
Richard Schugart models diabetic foot ulcers, an incredibly debilitating and underappreciated complication of an inā¦ https://t.co/F69sFCjFyz
Other clear takeaway message from Shahriyari is that wound healing processes are critical to pre-metastatic niches. #smb2017
Erica Rutter - Importance of developing Daphnia magna population models. #smb2017
Next up is Rachel Walker from @EnderlingLab on systemic tumor-immune dynamics in metastatic cancer #smb2017
Next up is Rachel Walker from @mathonco @EnderlingLab #smb2017
Walker: local treatment can induce rapid non-local outgrowth. And radiation therapy can change state of non-local mets. #smb2017
Walker: this points to perturbations of immune system that have systemic impact on distant mets #smb2017
Walker calls out @JPoleszczuk for critical work calculating blood flow, estimating which T-cells arrive at each site in metastasis #smb2017
Walker: see this great prior paper with @JPoleszczuk, @theheikman et al. in Canc Res 2016 #smb2017
https://t.co/1o4sUjbqlK
Walker: can eliminate 1 parameter in the original model, still get nearly same quality of fit. Nice reduction! #smb2017
Enjoying Sales, Pricing and Marketing talks at the SMB TechFest #smb #SMB2017 #techfest #orangecounty #technology https://t.co/ZMxq8UstUm
The final talk of the session comes from @thillen17, on the use of non-local birth-jump processes to model cancer spread #smb2017
Last talk this morning is @thillen17! On modeling cancer spread with non-local birth-jump processes. #smb2017
Closing out #SMB2017 with my talk "Optimal fishery harvesting modeling the effects of habitat degradation." today at 4:45, City Creek Room.
.@thillen17: classical reaction-diffusion cancer model only works if cell transport and birth are at diff., decoupled time scales #smb2017
.@thillen17: use a non-local birth/jump process to get ovarian metastatic spread in peritoneal cavity. #smb2017
Cell-to-cell transmission can allow the virus to escape immune response #SMB2017 https://t.co/0AezI765iu
@thillen17: "@theheikman told me that heterogeneity is very important. So I ignored him and first considered the homogeneous case!" #smb2017
Awesome! I'm in very good company. And we all had excellent source material. :) #SMB2017 https://t.co/qBGFSMuYwL
#smb2017 The best tweeter award winners! Paul Macklin, Courtney Davis, Joshua Bull, Keith Grant, Drew Williamson, Fergus Cooper.
@thillen17: Birth-jump models form new class of non-local continuum models. Open Q: how do they act in spatially explicit contexts? #smb2017
Last plenary talk at #smb2017. Mimi Koehl. Moving trhough a turbulent environment: Embedding models in real world data.
Koehl: How does turbulent flow affect (microscopic) organisms? #smb2017
Love that this is a thing! Shall we get a photo after the plenary? #SMB2017 @MathCancer @mathcourtney @ramblemuseā¦ https://t.co/4EI8iZIe3t
#smb2017 The best tweeter award winners! Paul Macklin, Courtney Davis, Joshua Bull, Keith Grant, Drew Williamson, Fergus Cooper.
Mimi Koehl is giving us a biologists view of mathematical biology in the final plenary session of #SMB2017
Koehl: Coral larvae in the water column have to settle out. How and where do they settle out? #smb2017
last plenary session by Mimi Koehl from @UCBerkeley - movement of microscopic organisms in real-world (turbulent) environments #smb2017
Koehl: Seaslug larvae are "competent" when old enuf to metamorph. Koehl tells grad students that younger are precompetent not in... #smb2017
@DFKW_MS4 @dendroicap I'd be prouder if you had a time turner and could have presented this today at #CaseCCC AND bā¦ https://t.co/x3imDjo7d5
Koehl: fast velocities inside waves only lead to a slow net transport shoreward...what impact does this have on larvae in reefs? #SMB2017
Koehl: "Large organism chauvinist pigs" look at flow at large scale - we need to consider flow on the scale of microscopic larvae! #SMB2017
Koehl: Wave driven transport through the reef is slow..#smb2017
Koehl: shows PLIF images (Planar laser induced fluorescence) showing a 1mm slice through a cloud of dye - really cool imaging! #SMB2017
Koehl: Hawaiian flow experiment Large yellow dye relase. Group of scientists onshore. tourist boat goes by #smb2017
Koehl Slug larvae flow passively with water flow but sink in response to coral scent #smb2017
Koehl: Swiming is the best strategy if you don't know where you're going. Swimming biases the environmental flow. #smb2017
If we are on our phones during your talk, it's not boredom, it's that you've said something awesome. #SMB2017 https://t.co/UvGG6HAkcL
Congrats @MathCancer @mathcourtney @JoshuaABull @DFKW_MS4 @FergusCooper @ramblemuse ! #SMB2017 https://t.co/rJ4eywRMZy
Koehl: Modeling helps test hypotheses and helps determine which parameters are important.#smb2017
#SMB2017: @MathBioPaul kicks off Part II: "Confronting Biological Models with Data" @smb2017 @mbi_osu https://t.co/2n0KcT9LUd
Baratchart: Build a model of macrophage plasticity in homeostasis, then add cancer dynamics after this #SMB2017
Baratchart: Are M1/M2 macrophages recruited from the blood? Are osteoclasts derived from recruited monocytes or resident MPs? #SMB2017
Best tweeters of #SMB2017! š@MathCancer @mathcourtney @JoshuaABull @DFKW_MS4 @FergusCooper @ramblemuse #KeepTweeting https://t.co/xwQuh6BRCF
That one of us on our phones is pure gold! #SMB2017 https://t.co/xzOivuxtig
Best tweeters of #SMB2017! š@MathCancer @mathcourtney @JoshuaABull @DFKW_MS4 @FergusCooper @ramblemuse #KeepTweeting https://t.co/xwQuh6BRCF
Baratchart: many "M1" macrophages in the data are really monocytes. How to deal with that when modelling? #SMB2017
"Save a newt; eat a crayfish!"
City Creek Room at 3:45-4 in the Ecological Dynamics section. #SMB2017 https://t.co/ABdbMcbeRy
Great twitter participation from our DPhil students @FergusCooper and @JoshuaABull at #SMB2017! https://t.co/6FEEG1U0DG
Best tweeters of #SMB2017! š@MathCancer @mathcourtney @JoshuaABull @DFKW_MS4 @FergusCooper @ramblemuse #KeepTweeting https://t.co/xwQuh6BRCF
Baratchart: estimates parameters for homeostasis; uses ODE modelling to test hypotheses regarding monocyte differentiation into MPs #SMB2017
Baratchart: M1 decay isn't due to natural die-off; plasticity of macrophages appears most likely reason #SMB2017
(1 of2) Lack of identifiability in parameters is numerically inconvenient but that may not be a problemā¦
#smb2017
(2 of 2) Itās a problem when we pretend we know a parameter and artificially deflate other confidence intervals. #smb2017 solution; Bayes!
Baratchart: Do M1 macrophages become M2 cells? (Would certainly correlate with my suspicions on spatial distributions!) #SMB2017
Great talk by @VectorBiTE_RCN PI Leah Johnson on using math & stat models + data to tackle vector born disease likeā¦ https://t.co/lEkXS5rP0N
Great talk by @VectorBiTE_RCN PI Leah Johnson on using math & stat models + data to tackle vector born disease likeā¦ https://t.co/wPPoC0hbqN
great lineup in last #smb2017 session - phenotypic plasticity in cancer cells: @dbasanta lab, V. Quaranta lab, @jgtzanudo, @mkjolly15
Totally uninformed that I should have made this account prior to leaving #SMB2017... #Regrets #Bayesic #UninformativePriors #BestConference
David Wooten presents a network model of SCLC phenotypic platicity. Read more here: https://t.co/g7ZL56VWdX #SMB2017 https://t.co/9LpEBflqHX
#SMB2017: "The great worm invasion; Invasive Species and Approximate Bayesian Computing" by @iamdavecampbellā¦ https://t.co/e01PqlCspl
@smb2017 #smb2017 @jgtzanudo elaborates motif detection for behavior identification in his networks https://t.co/4P4Ru0wMxL
@iamdavecampbell maybe Canadian worms move faster to keep warm? #SMB2017 #wormolympics #alberta https://t.co/SIxfStzhgP
#SMB2017: "The great worm invasion; Invasive Species and Approximate Bayesian Computing" by @iamdavecampbellā¦ https://t.co/e01PqlCspl
#SMB2017: Final speaker of "Confronting Biological Models with Data" is Dean Koch @smb2017 https://t.co/Oza3w4D4PV
#smb2017 @mkjolly15 on his model used to predict stable states in EMT, including hybrid states https://t.co/tQBg6DtShD
#smb2017 @mkjolly15 presents that hybrid phenotypes between epithilial and mesenchymal can be stable https://t.co/A8HvDLvsMK
@JoshuaABull @mathematista @KirschnerDenise Pic of @JoshuaABull tweeting about @MathCancer tweeting a pic ofā¦ https://t.co/Yiur3JtAXO
@smb2017 is a wrap! Thank you all for making it the best @SMB_MathBiology Annual Mweting yet. See you all atā¦ https://t.co/72gunAGSPQ
| Post Conference | to Top |
We've made it to the airport...thanks for organising such a great week @smb2017! #SMB2017
@NaraYoon12 had a poster w work presented also at #SMB2017 on chemotherapy scheduling with collaterally sensitive dā¦ https://t.co/bfEHWM5d8B
I will miss you, Utah, and all the amazing people I met here. It's been an exceptionally wonderful week. #SMB2017 #JPK70
The sacred coffee drip tray rocks āļøāļøāļø #uofu #SMB2017 #mathsā¦ https://t.co/C3BfWYwOeO
2 of 3 Past and current SMB presidents who are women out of 20! Yes that is shock! But a good trend! #SMB2017 https://t.co/DFoMkRfyyP
The inaugural class of the Society of Mathematical Biology Fellows. Congratulations to all!!
#SMB2017 https://t.co/CHMtWIWjC1
Great way to ring in #SMB2017 for Monday the 17th šš¼
Stay tuned for some #SMB2017 tweets too! There were many wonderful talks, but our (main) webmaster stuck to SI, SIR & SEIR models! š
Photos of #SMB2017 are up! Feel free to share your own in the album! https://t.co/JLvhE6X9L2
A simple autosummary of #SMB2017 generated by selecting the tweets with the highest word-pair usage scores. https://t.co/exG5lzHr4N
Congrats to JAX/@uconnhealth Professor Laubenbacher for being named an inaugural Fellow of the Society for Mathematā¦ https://t.co/J1SBd2bCPG